comparison regtools_junctions_extract.xml @ 1:e9dcea52d079 draft

planemo upload commit db634d933827ebc78981c7a0aa18205a85fa42e6-dirty

0:2626c5b4c665

            <when value="off" />
        </conditional>
    </inputs>
    <outputs>
        <data name="output1" format="bed" message="original output"/>
        <data name="fixed_output" format="bed" message="Check for lines with invalid BED format, if so remove the lines. This output is the one that should be used in HAC workflow"/>
    </outputs>
    <tests>
        <test>
            <!-- Test with default parameters -->
            <param name="input1" value="Dbia3_adult_males_shallow.bam" />

1:e9dcea52d079

            <when value="off" />
        </conditional>
    </inputs>
    <outputs>
        <data name="output1" format="bed" label="${tool.name} on ${on_string}: original output"/>
        <data name="fixed_output" format="bed" label="${tool.name} on ${on_string}: fixed_output for HAC workflow"/>
    </outputs>
    <tests>
        <test>
            <!-- Test with default parameters -->
            <param name="input1" value="Dbia3_adult_males_shallow.bam" />