Mercurial > repos > yating-l > jbrowsearchivecreator

changeset 16:a377a3afe210 draft

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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 594c5fa1e3cdb378ecf6b5490ec2cbac5fa8a61e-dirty
author yating-l
date Wed, 05 Jul 2017 16:04:19 -0400
parents 671231da45f9
children 74328b550a92
files TrackHub.py jbrowse_hub.xml
diffstat 2 files changed, 3 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/TrackHub.py	Wed Jul 05 15:47:15 2017 -0400
+++ b/TrackHub.py	Wed Jul 05 16:04:19 2017 -0400
@@ -153,6 +153,8 @@
             metadata['category'] = "Default group"
         if track['dataType'] == 'blastxml':
             metadata['type'] = "G-OnRamp_plugin/BlastAlignment"
+        if track['dataType'] == 'bigpsl':
+            metadata['type'] = "G-OnRamp_plugin/BlastAlignment"
         elif track['dataType'] == 'gff3_transcript' or track['dataType'] == 'gff3_mrna':
             metadata['type'] = "G-OnRamp_plugin/GenePred"
         else:
--- a/jbrowse_hub.xml	Wed Jul 05 15:47:15 2017 -0400
+++ b/jbrowse_hub.xml	Wed Jul 05 16:04:19 2017 -0400
@@ -192,6 +192,7 @@
                                 label="Blat Alignments File"
                         />
                         <param name="label" type="text" size="30" value="Blat Alignment" label="Track name" />
+                        <param name="track_color" type="color" label="Track color" value="#daa520">
                     </when>
                     <when value="bigwig">
                         <param