# HG changeset patch
# User yating-l
# Date 1510351423 18000
# Node ID 68466f5064ce239703106a0a5a22f808896e7027
# Parent  3285f5d22330ce14e3b5984a2832e73337696235
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit a500f7ab2119cc5faaf80393bd87428389d06880

diff -r 3285f5d22330 -r 68466f5064ce util/subtools.py
--- a/util/subtools.py	Wed Oct 25 13:24:24 2017 -0400
+++ b/util/subtools.py	Fri Nov 10 17:03:43 2017 -0500
@@ -229,7 +229,7 @@
     else:
         raise ValueError('Did not find bai file')
 
-def flatfile_to_json(inputFile, dataType, trackType, trackLabel, outputFolder, options=None, compress=False):
+def flatfile_to_json(inputFile, dataType, trackType, trackLabel, outputFolder, options=None, compress=True):
     if "bed" in dataType:
         fileType = "--bed"
     elif "gff" in dataType: