Mercurial > repos > yating-l > jbrowsearchivecreator

comparison TrackHub.py @ 18:466d52f83079 draft

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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 594c5fa1e3cdb378ecf6b5490ec2cbac5fa8a61e-dirty
author yating-l
date Thu, 06 Jul 2017 15:24:29 -0400
parents a377a3afe210
children df2a55f071fc
comparison
equal deleted inserted replaced
17:74328b550a92 18:466d52f83079
152 if 'category' not in metadata.keys() or metadata['category'] == '': 152 if 'category' not in metadata.keys() or metadata['category'] == '':
153 metadata['category'] = "Default group" 153 metadata['category'] = "Default group"
154 if track['dataType'] == 'blastxml': 154 if track['dataType'] == 'blastxml':
155 metadata['type'] = "G-OnRamp_plugin/BlastAlignment" 155 metadata['type'] = "G-OnRamp_plugin/BlastAlignment"
156 if track['dataType'] == 'bigpsl': 156 if track['dataType'] == 'bigpsl':
157 metadata['type'] = "G-OnRamp_plugin/BlastAlignment" 157 metadata['type'] = "G-OnRamp_plugin/BlatAlignment"
158 elif track['dataType'] == 'gff3_transcript' or track['dataType'] == 'gff3_mrna': 158 elif track['dataType'] == 'gff3_transcript' or track['dataType'] == 'gff3_mrna':
159 metadata['type'] = "G-OnRamp_plugin/GenePred" 159 metadata['type'] = "G-OnRamp_plugin/GenePred"
160 else: 160 else:
161 metadata['type'] = "CanvasFeatures" 161 metadata['type'] = "CanvasFeatures"
162 162