Mercurial > repos > yating-l > jbrowsearchivecreator
annotate test/lib/python2.7/encodings/uu_codec.py @ 3:7d1a9a91b989 draft
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
| author | yating-l | 
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| date | Thu, 18 May 2017 18:37:28 -0400 | 
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| rev | line source | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 1 """ Python 'uu_codec' Codec - UU content transfer encoding | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 2 | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 3 Unlike most of the other codecs which target Unicode, this codec | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 4 will return Python string objects for both encode and decode. | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 5 | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 6 Written by Marc-Andre Lemburg (mal@lemburg.com). Some details were | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 7 adapted from uu.py which was written by Lance Ellinghouse and | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 8 modified by Jack Jansen and Fredrik Lundh. | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 9 | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 10 """ | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 11 import codecs, binascii | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 12 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 13 ### Codec APIs | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 14 | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 15 def uu_encode(input,errors='strict',filename='<data>',mode=0666): | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 16 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 17 """ Encodes the object input and returns a tuple (output | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 18 object, length consumed). | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 19 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 20 errors defines the error handling to apply. It defaults to | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 21 'strict' handling which is the only currently supported | 
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7d1a9a91b989
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 22 error handling for this codec. | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 23 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 24 """ | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 25 assert errors == 'strict' | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 26 from cStringIO import StringIO | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 27 from binascii import b2a_uu | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 28 # using str() because of cStringIO's Unicode undesired Unicode behavior. | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 29 infile = StringIO(str(input)) | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 30 outfile = StringIO() | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 31 read = infile.read | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 32 write = outfile.write | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 33 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 34 # Encode | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 35 write('begin %o %s\n' % (mode & 0777, filename)) | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 36 chunk = read(45) | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 37 while chunk: | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 38 write(b2a_uu(chunk)) | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 39 chunk = read(45) | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 40 write(' \nend\n') | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 41 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 42 return (outfile.getvalue(), len(input)) | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 43 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 44 def uu_decode(input,errors='strict'): | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 45 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 46 """ Decodes the object input and returns a tuple (output | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 47 object, length consumed). | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 48 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 49 input must be an object which provides the bf_getreadbuf | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 50 buffer slot. Python strings, buffer objects and memory | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 51 mapped files are examples of objects providing this slot. | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 52 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 53 errors defines the error handling to apply. It defaults to | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 54 'strict' handling which is the only currently supported | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 55 error handling for this codec. | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 56 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 57 Note: filename and file mode information in the input data is | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 58 ignored. | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 59 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 60 """ | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 61 assert errors == 'strict' | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 62 from cStringIO import StringIO | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 63 from binascii import a2b_uu | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 64 infile = StringIO(str(input)) | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 65 outfile = StringIO() | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 66 readline = infile.readline | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 67 write = outfile.write | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 68 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 69 # Find start of encoded data | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 70 while 1: | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 71 s = readline() | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 72 if not s: | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 73 raise ValueError, 'Missing "begin" line in input data' | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 74 if s[:5] == 'begin': | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 75 break | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 76 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 77 # Decode | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 78 while 1: | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 79 s = readline() | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 80 if not s or \ | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 81 s == 'end\n': | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 82 break | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 83 try: | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 84 data = a2b_uu(s) | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 85 except binascii.Error, v: | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 86 # Workaround for broken uuencoders by /Fredrik Lundh | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 87 nbytes = (((ord(s[0])-32) & 63) * 4 + 5) // 3 | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 88 data = a2b_uu(s[:nbytes]) | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
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changeset | 89 #sys.stderr.write("Warning: %s\n" % str(v)) | 
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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit d583ac16a6c6942730ea536eb59cc37941816030-dirty
 yating-l parents: diff
changeset | 90 write(data) | 
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changeset | 91 if not s: | 
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changeset | 92 raise ValueError, 'Truncated input data' | 
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changeset | 93 | 
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changeset | 94 return (outfile.getvalue(), len(input)) | 
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changeset | 95 | 
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changeset | 96 class Codec(codecs.Codec): | 
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changeset | 97 | 
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changeset | 98 def encode(self,input,errors='strict'): | 
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changeset | 99 return uu_encode(input,errors) | 
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changeset | 100 | 
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changeset | 101 def decode(self,input,errors='strict'): | 
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changeset | 102 return uu_decode(input,errors) | 
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changeset | 103 | 
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changeset | 104 class IncrementalEncoder(codecs.IncrementalEncoder): | 
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changeset | 105 def encode(self, input, final=False): | 
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changeset | 106 return uu_encode(input, self.errors)[0] | 
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changeset | 107 | 
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changeset | 108 class IncrementalDecoder(codecs.IncrementalDecoder): | 
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changeset | 109 def decode(self, input, final=False): | 
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changeset | 110 return uu_decode(input, self.errors)[0] | 
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changeset | 111 | 
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changeset | 112 class StreamWriter(Codec,codecs.StreamWriter): | 
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changeset | 113 pass | 
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changeset | 114 | 
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changeset | 115 class StreamReader(Codec,codecs.StreamReader): | 
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changeset | 116 pass | 
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changeset | 117 | 
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changeset | 118 ### encodings module API | 
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changeset | 119 | 
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changeset | 120 def getregentry(): | 
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changeset | 121 return codecs.CodecInfo( | 
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changeset | 122 name='uu', | 
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changeset | 123 encode=uu_encode, | 
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changeset | 124 decode=uu_decode, | 
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changeset | 125 incrementalencoder=IncrementalEncoder, | 
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changeset | 126 incrementaldecoder=IncrementalDecoder, | 
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changeset | 127 streamreader=StreamReader, | 
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changeset | 128 streamwriter=StreamWriter, | 
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changeset | 129 _is_text_encoding=False, | 
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changeset | 130 ) | 
