# HG changeset patch
# User yating-l
# Date 1490993758 14400
# Node ID f9efad3819480074b7e65224c59c966a31fe3467
# Parent  95b9d8acc2357e6041d1e8914ff4bf5756bdaa9a
planemo upload for repository https://github.com/Yating-L/jbrowse_hub commit a505d6c97db9d044761b5ce92be4a39cb84eda29-dirty

diff -r 95b9d8acc235 -r f9efad381948 TrackHub.py
--- a/TrackHub.py	Fri Mar 31 12:38:58 2017 -0400
+++ b/TrackHub.py	Fri Mar 31 16:55:58 2017 -0400
@@ -78,7 +78,7 @@
         source_name = os.path.basename(self.out_path)
         source = os.path.join(source_dir, folder_name, source_name)
         slink = source.replace('/', '_')
-        slink = os.path.join('/home/galaxy/galaxy/static/JBrowse-1.12.1/data', slink)
+        slink = os.path.join('/var/www/html/JBrowse-1.12.1/data', slink)
         try:
             if os.path.islink(slink):
                 os.unlink(slink)
@@ -107,7 +107,7 @@
         with open(self.outfile, 'w') as htmlfile:
             htmlstr = 'The JBrowse Hub is created: <br>'
             zipfiles = '<li><a href = "%s">Download</a></li>'
-            jbrowse_hub = '<li><a href = "/gonramp/static/JBrowse-1.12.1/index.html?data=%s" target="_blank">View JBrowse Hub</a></li>'
+            jbrowse_hub = '<li><a href = "/JBrowse-1.12.1/index.html?data=%s" target="_blank" onclick="javascript:window.location.port=80">View JBrowse Hub</a></li>'
             filedir_abs = os.path.abspath(self.outfile)
             filedir = os.path.dirname(filedir_abs)
             filedir = os.path.join(filedir, self.outfolder)