# HG changeset patch
# User yating-l
# Date 1489768628 14400
# Node ID f45a253f7c6abc7e65d2b3be0ae0b1f7dd3d22d9
# Parent  d8049deb0c97c90b067d5078d1fdee751d4d5691
planemo upload for repository https://github.com/Yating-L/jbrowse_hub commit faeedda55e23f1197bc454d3db2d52af29d786e8-dirty

diff -r d8049deb0c97 -r f45a253f7c6a jbrowse_hub.xml
--- a/jbrowse_hub.xml	Fri Mar 17 12:28:32 2017 -0400
+++ b/jbrowse_hub.xml	Fri Mar 17 12:37:08 2017 -0400
@@ -56,7 +56,6 @@
                 #if $f.formatChoice.gff3Choice.gff3_select == 'gff3_transcript'
                     --gff3_transcript $f.formatChoice.gff3Choice.GFF3_transcript
                     #silent $prepare_json($f.formatChoice.gff3Choice.GFF3_transcript, extra_data_dict)
-                #end if
                 #elif $f.formatChoice.gff3Choice.gff3_select == 'gff3_mrna'
                     --gff3_mrna $f.formatChoice.gff3Choice.GFF3_mrna
                     #silent $prepare_json($f.formatChoice.gff3Choice.GFF3_mrna, extra_data_dict)
@@ -77,9 +76,9 @@
        #end for
 
        #set all_data_json = json.dumps($data_parameter_dict)
-        -j '$all_data_json'
-        -e '$output.extra_files_path'
-        -o '$output'
+       -j '$all_data_json'
+       -e '$output.extra_files_path'
+       -o '$output'
 
     ]]></command>