# HG changeset patch
# User yating-l
# Date 1490030134 14400
# Node ID 37422f705e9b2a3237403d95e6e7c514bf19f10e
# Parent  b32f9f4793f8c7bb9fb8bc84f4641f49a4bc120b
planemo upload for repository https://github.com/Yating-L/jbrowse_hub commit 149c5cbda82f49f260767b5710f0c2160eebc881-dirty

diff -r b32f9f4793f8 -r 37422f705e9b TrackHub.py
--- a/TrackHub.py	Mon Mar 20 12:46:12 2017 -0400
+++ b/TrackHub.py	Mon Mar 20 13:15:34 2017 -0400
@@ -107,7 +107,8 @@
         bam_track['storeClass'] = 'JBrowse/Store/SeqFeature/BAM'
         bam_track['urlTemplate'] = os.path.join('../raw', track['fileName'])
         bam_track['baiUrlTemplate'] = os.path.join('../raw', track['index'])
-        bam_track.update(metadata)
+        bam_track['label'] = metadata['label']
+        bam_track['category'] = metadata['category']
         utils.add_tracks_to_json(json_file, bam_track, 'add_tracks')
 
     def BigWig(self, track, metadata):
@@ -120,7 +121,9 @@
         bigwig_track['urlTemplate'] = os.path.join('../raw', track['fileName'])
         bigwig_track['type'] = 'JBrowse/View/Track/Wiggle/XYPlot'
         bigwig_track['storeClass'] = 'JBrowse/Store/SeqFeature/BigWig'
-        bigwig_track.update(metadata)
+        bigwig_track['label'] = metadata['label']
+        bigwig_track['style'] = metadata['style']
+        bigwig_track['category'] = metadata['category']
         utils.add_tracks_to_json(json_file, bigwig_track, 'add_tracks')
 
     #If the metadata is not set, use the default value