comparison trackObject.py @ 37:046c5bfc0413 draft

planemo upload for repository https://github.com/Yating-L/jbrowse_hub commit faeedda55e23f1197bc454d3db2d52af29d786e8-dirty

36:d5ec43607f66

        elif dataType == 'gtf':
            utils.gtfToGff3(dataFile, des_path, self.chrom_size)
        track['fileName'] = fileName
        track['dataType'] = dataType
        track.update(metaData)
        if 'label' not in metaData.keys():
            track['label'] = fileName
        self.tracks.append(track)

37:046c5bfc0413

        elif dataType == 'gtf':
            utils.gtfToGff3(dataFile, des_path, self.chrom_size)
        track['fileName'] = fileName
        track['dataType'] = dataType
        track.update(metaData)
        #If the metadata is not set, use the default value
        if 'name' not in metaData.keys() or track['name'] == '':
            track['name'] = fileName
        if 'label' not in metaData.keys() or track['label'] == '':
            track['label'] = track['name']
        if 'track_color' not in metaData.keys() or track['track_color'] == '':
            track['track_color'] = "#daa520"
        if 'track_type' not in metaData.keys() or track['track_type'] == '':
            track['track_type'] = "CanvasFeatures"
        self.tracks.append(track)