diff macros.xml @ 3:fa990284327b draft default tip

planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit ac73da32d59853ca563e7939d05016a6f3a6899e-dirty

--- a/macros.xml	Fri Sep 29 14:50:50 2017 -0400
+++ b/macros.xml	Mon Oct 30 11:58:31 2017 -0400
@@ -52,50 +52,21 @@
 
     <xml name="add_trix_file">
         <conditional name="add_trix_index">
-            <param name="add_trix_index_selector" type="select" label="Add TRIX files that maps free text to a set of indices" >
+            <param name="add_trix_index_selector" type="select" label="Add Trix index that allow for fast look-up of free text associated with a list of identifiers." help="More about Trix index: https://genome.ucsc.edu/goldenpath/help/trix.html">
                 <option value="no" selected="true">No</option>
                 <option value="yes">Yes</option>
             </param>
 
             <when value="yes">
                 <param 
-                    name="trix_id" 
-                    value="name" 
-                    type="text"
-                    size="30"
-                    label="Specify Trix identifier"
-                    help="More about Trix index: https://genome.ucsc.edu/goldenpath/help/trix.html"
+                    name="trix_index" 
+                    format="txt" 
+                    type="data_collection" 
+                    collection_type="list" 
+                    label="Specify Trix index" 
+                    help="Dataset collection containing ix and ixx files generated by UCSC Trix Index Generator"
                 />
-                <conditional name="index_files">
-                    <param name="index_files_type" type="select" label="Single files or an index collection" help="Select between provide individual trix files (ix and ixx) or an trix index collection">
-                        <option value="collection">Index collection</option>
-                        <option value="single">Single files</option>
-                    </param>
-                    <when value="collection">
-                        <param 
-                            name="trix_index" 
-                            format="txt" 
-                            type="data_collection" 
-                            collection_type="list" 
-                            label="Select dataset collection" 
-                            help="Specify dataset collection containing ix and ixx files"
-                        />
-                    </when>
-                    <when value="single">
-                        <param
-                            format="txt"
-                            name="index_ix"
-                            type="data"
-                            label="Trix index file (ix)"
-                        />
-                        <param
-                            format="txt"
-                            name="index_ixx"
-                            type="data"
-                            label="Trix index file (ixx)"
-                        />
-                    </when>
-                </conditional>
+                <yield />
             </when>
             <when value="no">
             </when>