Mercurial > repos > yating-l > hubarchivecreator
changeset 63:e50fc56bd10d draft
Uploaded
| author | yating-l |
|---|---|
| date | Wed, 09 Aug 2017 16:38:02 -0400 |
| parents | 4c4e8941feda |
| children | 9d8d6b976fc2 |
| files | hubArchiveCreator.xml |
| diffstat | 1 files changed, 15 insertions(+), 1 deletions(-) [+] |
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--- a/hubArchiveCreator.xml Mon Jul 10 17:06:11 2017 -0400 +++ b/hubArchiveCreator.xml Wed Aug 09 16:38:02 2017 -0400 @@ -117,6 +117,10 @@ #end if #if $f.formatChoice.bedChoice.bed_select == "bed_blat_alignment_option" --bigpsl $f.formatChoice.bedChoice.BED_blat_alignment + #if $f.formatChoice.bedChoice.if_index.if_index_selector == "true" + #set search_index = $f.formatChoice.bedChoice.if_index.search_index + #silent extra_data_dict.update({"search_index": $search_index}) + #end if #set database = str($f.formatChoice.bedChoice.database) #silent extra_data_dict.update({"database": $database}) #silent $prepare_json($f.formatChoice.bedChoice.BED_blat_alignment, $index_track_final, @@ -286,7 +290,17 @@ <param name="database" type="select" label="mRNA database"> <option value="NCBI" selected="true">NCBI</option> <option value="Others">Others</option> - </param> + </param> + <conditional name="if_index"> + <param name="if_index_selector" type="select" label="Provide TRIX file for searchTrix"> + <option value="true" selected="True">Provide TRIX file</option> + <option value="false">Don't provide TRIX file</option> + </param> + <when value="true"> + <param format="txt" name="search_index" type="data" label="trix index file" /> + </when> + <when value="false"></when> + </conditional> </when> </conditional> <param name="longLabel" type="text" size="76" label="Track label" help="It is limited to 76 printable characters, the first 17 printable characters will be used as a short label of the track" />