diff Psl.py @ 52:c66803bff0cc draft

planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit adc1ac50269e02570e7ce12c732637bdd3f9a547-dirty
author yating-l
date Thu, 11 May 2017 17:21:15 -0400
parents 3e0c61b52a06
children b39dd0b5a166
line wrap: on
line diff
--- a/Psl.py	Wed Apr 12 16:51:03 2017 -0400
+++ b/Psl.py	Thu May 11 17:21:15 2017 -0400
@@ -19,7 +19,10 @@
         self.track_color = data_psl["track_color"]
         # TODO: Think about how to avoid repetition of the group_name everywhere
         self.group_name = data_psl["group_name"]
-
+        if data_psl["long_label"]:
+            self.long_label = data_psl["long_label"]
+        else:
+            self.long_label = self.name_psl
         # Temporary files
         unsorted_bed_formatted_psl_file = tempfile.NamedTemporaryFile(suffix='.psl')
         sorted_bed_formatted_psl_file = tempfile.NamedTemporaryFile(suffix='psl')
@@ -50,7 +53,7 @@
         # Create the Track Object
         self.createTrack(file_path=trackName,
                          track_name=trackName,
-                         long_label=self.name_psl,
+                         long_label=self.long_label,
                          track_type='bigPsl', visibility='dense',
                          priority=self.priority,
                          track_file=my_big_psl_file_path,