diff macros.xml @ 66:4ca7cbf2d9b8 draft

planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 159730602ff500b59aefc7080fb49b726c88d655-dirty
author yating-l
date Tue, 26 Sep 2017 16:44:58 -0400
parents
children b724e559907e
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macros.xml	Tue Sep 26 16:44:58 2017 -0400
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+<macros>
+    <xml name="verify_hub_structure" token_genome="Dbia3" token_test="common">
+        <!--genomes.txt -->
+        <extra_files type="file" name="myHub/genomes.txt" value="@TEST@/myHub/genomes.txt" />
+
+        <extra_files type="file" name="myHub/@GENOME@.html" value="@TEST@/myHub/@GENOME@.html"/>
+        <!-- hub.txt -->
+        <extra_files type="file" name="myHub/hub.txt" value="@TEST@/myHub/hub.txt" lines_diff="2">
+            <assert_contents>
+                <has_text text="email"/>
+            </assert_contents>
+        </extra_files>
+        <!-- 2bit file -->
+        <extra_files type="file" name="myHub/@GENOME@/@GENOME@.2bit" value="common/@GENOME@.2bit" />
+        <!-- groups.txt -->
+        <extra_files type="file" name="myHub/@GENOME@/groups.txt" value="@TEST@/myHub/@GENOME@/groups.txt" />
+        <!-- description.html -->
+        <extra_files type="file" name="myHub/@GENOME@/description.html" value="@TEST@/myHub/@GENOME@/description.html"/>
+        <!-- trackDb.txt -->
+        <extra_files type="file" name="myHub/@GENOME@/trackDb.txt">
+            <assert_contents>
+                <has_text text="track"/>
+                <has_text text="longLabel"/>
+                <has_text text="shortLabel"/>
+                <has_text text="bigDataUrl"/>
+                <has_text text="type"/>
+                <has_text text="visibility"/>
+                <has_text text="thickDrawItem"/>
+                <has_text text="priority"/>
+                <has_text text="color"/>
+                <has_text text="group"/>
+            </assert_contents>
+        </extra_files>
+    </xml>
+
+    <xml name="verify_hub_structure_no_track" token_genome="Dbia3" token_test="common">
+        <!--genomes.txt -->
+        <extra_files type="file" name="myHub/genomes.txt" value="@TEST@/myHub/genomes.txt" />
+
+        <extra_files type="file" name="myHub/@GENOME@.html" value="@TEST@/myHub/@GENOME@.html"/>
+        <!-- hub.txt -->
+        <extra_files type="file" name="myHub/hub.txt" value="@TEST@/myHub/hub.txt" lines_diff="2">
+            <assert_contents>
+                <has_text text="email"/>
+            </assert_contents>
+        </extra_files>
+        <!-- 2bit file -->
+        <extra_files type="file" name="myHub/@GENOME@/@GENOME@.2bit" value="common/@GENOME@.2bit" />
+        <!-- description.html -->
+        <extra_files type="file" name="myHub/@GENOME@/description.html" value="@TEST@/myHub/@GENOME@/description.html"/>
+    </xml>
+</macros>
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