Mercurial > repos > yating-l > hubarchivecreator
comparison Psl.py @ 58:a0fc8379223c draft
planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 72268f816f10341dbe3f6b33f8d9170d859c9697
author | yating-l |
---|---|
date | Fri, 30 Jun 2017 15:44:17 -0400 |
parents | b39dd0b5a166 |
children |
comparison
equal
deleted
inserted
replaced
57:b39dd0b5a166 | 58:a0fc8379223c |
---|---|
47 subtools.bedToBigBed(sorted_bed_formatted_psl_file.name, | 47 subtools.bedToBigBed(sorted_bed_formatted_psl_file.name, |
48 self.chromSizesFile.name, | 48 self.chromSizesFile.name, |
49 big_psl_file.name, | 49 big_psl_file.name, |
50 autoSql=auto_sql_option, | 50 autoSql=auto_sql_option, |
51 typeOption='bed12+12', | 51 typeOption='bed12+12', |
52 tab=True) | 52 tab=True, |
53 extraIndex='name') | |
53 | 54 |
54 # Create the Track Object | 55 # Create the Track Object |
55 self.createTrack(file_path=trackName, | 56 self.createTrack(file_path=trackName, |
56 track_name=trackName, | 57 track_name=trackName, |
57 long_label=self.long_label, | 58 long_label=self.long_label, |