Mercurial > repos > yating-l > hubarchivecreator
comparison Gtf.py @ 58:a0fc8379223c draft
planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 72268f816f10341dbe3f6b33f8d9170d859c9697
author | yating-l |
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date | Fri, 30 Jun 2017 15:44:17 -0400 |
parents | b39dd0b5a166 |
children |
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57:b39dd0b5a166 | 58:a0fc8379223c |
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65 subtools.bedToBigBed(sorted_bigGenePred_file.name, | 65 subtools.bedToBigBed(sorted_bigGenePred_file.name, |
66 self.chromSizesFile.name, | 66 self.chromSizesFile.name, |
67 bigBedFile.name, | 67 bigBedFile.name, |
68 autoSql=auto_sql_option, | 68 autoSql=auto_sql_option, |
69 typeOption='bed12+8', | 69 typeOption='bed12+8', |
70 tab=True) | 70 tab=True, |
71 extraIndex='name') | |
71 | 72 |
72 | 73 |
73 # Create the Track Object | 74 # Create the Track Object |
74 self.createTrack(file_path=trackName, | 75 self.createTrack(file_path=trackName, |
75 track_name=trackName, | 76 track_name=trackName, |