Mercurial > repos > yating-l > hubarchivecreator
comparison Gff3.py @ 58:a0fc8379223c draft
planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 72268f816f10341dbe3f6b33f8d9170d859c9697
| author | yating-l |
|---|---|
| date | Fri, 30 Jun 2017 15:44:17 -0400 |
| parents | b39dd0b5a166 |
| children |
comparison
equal
deleted
inserted
replaced
| 57:b39dd0b5a166 | 58:a0fc8379223c |
|---|---|
| 54 subtools.bedToBigBed(sorted_biGenePred_file.name, | 54 subtools.bedToBigBed(sorted_biGenePred_file.name, |
| 55 self.chromSizesFile.name, | 55 self.chromSizesFile.name, |
| 56 bigBedFile.name, | 56 bigBedFile.name, |
| 57 autoSql=auto_sql_option, | 57 autoSql=auto_sql_option, |
| 58 typeOption='bed12+8', | 58 typeOption='bed12+8', |
| 59 tab=True) | 59 tab=True, |
| 60 extraIndex='name') | |
| 60 | 61 |
| 61 # Create the Track Object | 62 # Create the Track Object |
| 62 self.createTrack(file_path=trackName, | 63 self.createTrack(file_path=trackName, |
| 63 track_name=trackName, | 64 track_name=trackName, |
| 64 long_label=self.long_label, | 65 long_label=self.long_label, |