Mercurial > repos > yating-l > data_manager_fetch_reference_data

diff data_manager_conf.xml @ 0:099d2508bcc3 draft

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planemo upload
author yating-l
date Wed, 03 May 2017 16:18:10 -0400
parents
children 5349705442d0
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Wed May 03 16:18:10 2017 -0400
@@ -0,0 +1,18 @@
+<?xml version="1.0"?>
+    <data_managers>
+        <data_manager tool_file="data_manager/fetch_reference_data.xml" id="fetch_reference_data"> 
+            <data_table name="glimmer_hmm_trained_dir">
+                <output>
+                    <column name="value" />
+                    <column name="name" />
+                    <column name="path" output_ref="out_file">
+                        <move type="file">
+                            <source>${path}</source>
+                            <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${name}/${path}</target>
+                        </move>
+                        <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${name}/${path}</value_translation>
+                    </column>
+                </output>
+            </data_table>
+        </data_manager>
+    </data_managers>
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