Mercurial > repos > yating-l > bigbed_to_fa_340
comparison test-data/contigs.models_12_2.fa @ 0:512ed6da2367 draft default tip
planemo upload
| author | yating-l |
|---|---|
| date | Wed, 17 May 2017 16:49:32 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:512ed6da2367 |
|---|---|
| 1 >CG33978-RD | |
| 2 AAAACAGTGGAAGACATGTTTCTTGCTTCCAAGCAGTTAACAGGTCGGGA | |
| 3 AGAATTAATACGAGGTATGTACAGGTGTCGGAGAACACAATGGAAGAAGC | |
| 4 AAGGTATAATCTTGCCACTCACGTTATGTCAAATGGAGTAGAACTAATTA | |
| 5 TTGCCTGTGAAAGGGAAAAACCTATGGAAAAGATCGTGGCAACTACCCAA | |
| 6 AAACTTACAAATGTTATTAGTCGACTGATAATACAACAATTCGACAAGCC | |
| 7 CTCGACTCTGGCTCCAAGTACATTAAAAAATCAGATGATTTTAACATTGC | |
| 8 CTTCAATTAAACAGGAAACCATTTTACTTCCTCATAATTCTTTTATTACA | |
| 9 AACATTTTTCTAACCACGTGCACCTATATCACAACATATGTGGAAAATGG | |
| 10 AAGCTCGAATGTAGTAAAAGAAAAAATGGTTATATCAAACACCATTACGC | |
| 11 AAGATCGAAAGTATTTGCATGCAAGTAATCCTATGATAATAGACATCACT | |
| 12 TTTTCAAGGACTCCAGAACTAGTGGTTGGAATGTTCCCAACAAGATATCA | |
| 13 TTATTTTAACACAATACGTAGAGACCAACCGGATTCAACTCTAATGGTAG | |
| 14 TCACTTCAAAATATACTGTTATAAATACAATCACGAGACCTGCACATTCT | |
| 15 TTGACTTTTATAAATTCAGGCGACAATCTTTCGCCCACCACAAATACCTA | |
| 16 CATCAGTCAAATATTTTTTACTAAAACTGTCTACGGCAAAAACCAAACAC | |
| 17 CAACATATGGCACAAGTATAAGTAATCTTACACAAGTCGTTATTACAGAA | |
| 18 TCCCTTTCAGAAACCGGTCCAGCTTATATAAGTTCAATAGGACCTGAGTA | |
| 19 TTTTTCAATTTCGGACAAAAAAAAAAATTATTTACTTCGGTAATAGAAAT | |
| 20 ATCTGACTATCTAATGATATACTCAACCAAGTCCTTATTAGAAACGAATA | |
| 21 CTCTATGTTCAGCAAAATTTAATAATAGTTTGACTATGGTAGCTTCATAT | |
| 22 GTTTCTTTGACAAAGACAGTCTGCGAAAGTGATCCAAAAGTATCTAACAA | |
| 23 TAACTTAAAGCTTCACACTAACACTATAAATAATATTGCTACCAATACAG | |
| 24 TGGGTAGTTCGCTGATAAACTCAGATCTTTTATTTTCTATCAAATCCGCA | |
| 25 CTTATGCTTAAAAAGAGAAACAACCAACGCCAAACTATTGTAACAATGGC | |
| 26 CACATTGGGGGCAGGTGAAACTATTAAAGTAACTGCCGTGAATATAATCA | |
| 27 AAAAACCAAATTGGAAATATATTTCCACTTTGGCAAAGGCAAAGGAATAT | |
| 28 TGTAATTCTGAAATGAGTGATACATGTACATCTAATGACACAAAATCAAC | |
| 29 TTTTAGTTCAAAACTACCCCACTTTTCTGAAAATACTATAAATATATCAG | |
| 30 AAAAAAGCAGCGTCATCAAGAACATTTATAGGAACAATATTACACAATTT | |
| 31 TTATTAGAGGAAACTGAAAATAATGAAATGTTGATAAAAAATAAAAAACT | |
| 32 AATAAAGCCTTCAATGTTCAGTTCATTAGTGTCTTCACAGGGCACAAGCT | |
| 33 CTGAAAACTGGAATTTAGAGCGTTTTCGCCCAATGCTGAATGTCGTAGCA | |
| 34 AACTTAATTAAAAACCAACTAACTAATACACAATATACGCAACTTCATAC | |
| 35 ACATTCATTTATAAAAGGCAAATCAGGAACAACAACGAAAAATCCTATTT | |
| 36 ATATACCTTTAAAGCGAAATGTGAAAGGCAAACCCTTAAACATGACGAAT | |
| 37 GCAAAACCAAATACGGCTGATTTACTCGGAAAATTAAAAATTATGGCATT | |
| 38 ACATATACATCCCCCAATGACGTATGTACTAAATAAGTGTCTAAAACATA | |
| 39 ATCTAAAAAAACTTTCATCTTCCGTCGGATATAAAGGAACATCTATGGTG | |
| 40 TATAGGAACGCGTTCATTAATCCAGGTATTCCCATTAGACCCGGAGAGGT | |
| 41 TATAACAGCCAGCGCTAATGTTATATTTGGAAAGCCAAGTATTGAGCAAA | |
| 42 ACATTAGAACTACGATAACGAATCGTCCCTTAACTTCGATAAATTCGATT | |
| 43 TACCCCAGTGATGAAAGGATCCATTCCACTATGGTACACAGTTCCTTTTC | |
| 44 GTATGAAAATGAAATTATGACAGAGTACGCCACTTTATTAAAGCCTCCAC | |
| 45 CACTGCCTGCAAATCGACTACTACAGTACACATCAACATTCCAGTCTCAA | |
| 46 ATGGGAAGAACGAGGAATGCTGCAAAAAATTGGTTTTCACCAATTACAGT | |
| 47 TTTACAAAACAATCCGATTTATGATTACTATTCATCTGAGACACAAATAA | |
| 48 ACTTAAATACTGACTTTTTTGTATTTCGAATACCACAAATTGTTGGTGAA | |
| 49 AGTCGGCCAGCTACTGCAAGTTATACTGTGTCAAACACGCTTGACTATTC | |
| 50 TTTAATTCATGATTGTTCTTTCGACTCTTTAAAACCAACTTTGTCTTACA | |
| 51 TGACGCCTATTTCTACATTTTCTACCCTTCACCAAATTAACCTTAAAAAT | |
| 52 GACGTCATTAGCCATACAATTAATATGCAAGCTCGCCCTCTAACGTTTAA | |
| 53 AAGGGAATCCGATAATATTCCGCACGCAACAACCGTAAGAGGTCATATGG | |
| 54 ATAGTTTTTTAATTTCACAAATTAAAATACCTTTTAATGACAAAAATGTT | |
| 55 GAAGTCCAGTTGACGGCCAACCGGAAAAGAGTTTTTCCCGTTCAATATAA | |
| 56 GGACTTAACGTCAGATGAGACTAATATTAAATTGGAACAACGAACTAATA | |
| 57 TATTAAGCAACTATGAGAATGCTCAGCATTTATTTTCCTTTAAGGATATT | |
| 58 AAAACCCATAGCGGATTAAACAATTATACTTCTATATACAAAAATGAATA | |
| 59 TTTTTCTCAAACTACTTCTAACCTCAATCATTCAGATAATATGAATGGTA | |
| 60 AACCAATAAGACATGATAATGGAATTCCTAAAGAAAATATAGAACAATTT | |
| 61 ACAGAGCTAGATCAAAAAGCAGAAAACTCAAACAAATCATTGTACTTTTT | |
| 62 AAGGTTTAATTCTACTAAAAAACGCGATCTTAACAGTACAACTACATTAA | |
| 63 ATATCTGGTCTTCAATGATTAAATATTTAAGTATAGCCATGCCTAAGAGT | |
| 64 GTACACACAAATACAAAATCGTTGATGTCTACAAAAAGACGTATTGAGAC | |
| 65 TGGCAATACAAACATGGTGTTTCTGACAACAGGTGACCATTTGCGTGTCG | |
| 66 AACCCTTAACAGAAAATACAATTAATTCAGTAAATTCTGAATTTATCTCG | |
| 67 AGCACAAACATCTTTAACACAAATTACTCAGTTATCGCTACTGAACCCTC | |
| 68 TCAACTAAGATCAAGAATATATAAAGAATCAAATATGTTTGGCCTTACGT | |
| 69 CAAACAACAACCTCCAGGTAAAACCATCTTTTGTAAAACCCCTGCGCAGT | |
| 70 TCAGCAATGCCAGTTATAAATGCAATTACATTTTCACACGTTTTAGTAAG | |
| 71 AGCACCGCATTCTGACTTTGGTCCAAACTGGCAAGATTCGACATTAGGCA | |
| 72 TAATATGCCACACTGAAAGTTGCAAAAAAAAATTATTAAAAGAATTTAAG | |
| 73 CACGATATCAAAATGCTTGAACCATCTGAAATGTTGCAGGATGAAATACC | |
| 74 TTCAGTTTCAAAAAAAACATCTGAATGGGATAAGATTTCAGTGCTAGCAG | |
| 75 AAAATTCGAACGCCATAATCCCTATGCATTCTACACCTTCGCATACTAAC | |
| 76 AAAACAATTAAATATTTTAAAATAGTAACCCCCACTAAAACAAACCGGGT | |
| 77 TAGTATAAAAAACGTATCTACAATCAAAACAAATTTTGATGCAAATAAAT | |
| 78 ACATATTTATGAATCACTCTATCGCTAACCTATCGAAATACTATATGAAG | |
| 79 GAACCAATTTCGATTGGTTCAGACAAATTATTTACATCCTCAAGGATAAG | |
| 80 CAACCAGTCACAAGTAATTGACAAAAGTAATGTTACAACTTTAAGTGACG | |
| 81 TGCCTCAAAGATTAAAGACTTCAGACTATCTAGCGAACGAATCTTTTACA | |
| 82 GAAAACATTTTAGGGTTTTCCAAGCACTCAGGGCTCAGAAGCAAATCAAG | |
| 83 CTTAGGTTCTAATCGAGATGAGCATGTGTATGCTTCCAGCGACATAGATA | |
| 84 GTATGCTCTTTGGTGCTATTGTTGCTGATTCATTTTTAAAGACAAATTAT | |
| 85 GCAAAAAAAAACAAATCTTTTAATGGTTGCCATCCGCCGTGCAGATTGAA | |
| 86 CAAAAATGAATTATGCGTTACTTATGCTAATAATACCGAGTCCTCGAGTC | |
| 87 TTTGTGAATGCCGACCAAGTTTTGGACGCATGTTTCCCGACCGACCTTGC | |
| 88 AGACCTACTTATACTTACGAAATGAAGATTCAAGTCAACTGGGCGGGCAA | |
| 89 CCACTCTATAAAGCTTGGCGATATCATGAAAAGTAATTTGAAAAATGAAA | |
| 90 CTTCTTATATAAATACAATTTTATTAGAAGCAGCTGATCGCATGGTTATG | |
| 91 CAATCTGATTATAGAGATATTTTTCATGGTGTTCAGTTACGAAAAGTTTT | |
| 92 TGTAGAAGAAAAAGATAAGTTAACGGTTACGTTCCTGCTACAGTTGTCAG | |
| 93 AGAATAGTGATGAGGATCAACTTAATTCCGTCTTTCAAAAGTATTTACGG | |
| 94 CAAAGCAACTTCAGTATTGGAGGCACTGGATTTTACACTTCAAAAAACAG | |
| 95 TCTACACTTACTAGAATTTAAAGATTTTGACGAATGTCGTTACGAAAACT | |
| 96 TTAACGACTGTTCTACTGATGCCAACTGTTTTAATTTGGTTGGCAGCTAC | |
| 97 ACTTGCAGTTGCAAAGAGGGTTACACAGATTCATCTAATAATTATTTATA | |
| 98 CCCAGGTCGACATTGCTCAAATAATATAATCGGCTGCGATGATTGTAACT | |
| 99 ATAATGGCAAATGTATGAATAAGTCGGATGACCACGGGCATCAGGGGATA | |
| 100 ACCTTATGTAAATGCTTTTCTTGGTACGCTGGAACAAAGTGTCAAGTTAA | |
| 101 CATGAAGGTCATAATAGTCTTTCTTTTTATGAGTGGAACCTTTTTGTCCT | |
| 102 TTTTTCTTCTTTTATTCTTCCTTAAAACAAACACCAAGCTTAAAAGGCTA | |
| 103 GACAACGGAAAAGCAAGCAAATTATGCACTGCGCCTTCCAATATAAATCC | |
| 104 TAGTTTATTAACATCAACCGAAATAATTCGACCAACTTACAGTAAAAAAG | |
| 105 AATCTATCAGTAAATTAGGTCAATGCATGACTTCCAATTCTAAAGAGAAA | |
| 106 TATATTGGTGTGCATAATACTTATTTTAAACCTGCAGAACTTAAAGAAAG | |
| 107 GTTGACACATAGTTACAAGGCTTCTTCATCCTCTTACTTGAGCAATGATT | |
| 108 TTAATATCAAGAGTACAACTAAAGAACACGGTTTTTTGCATAGTAGTGAA | |
| 109 GACCATAGCCCAGAAGAAGACCAAACAGAGCGATCTCTTACCCTTATGAT | |
| 110 TCCAAGGGCAAAATATTGTTTACCCTACATTGCTCAAAACTCTCATTTAC | |
| 111 CTCATCACGCTAATAAATCATTTATGGATAATACAGAGCAAAGGGCAGTA | |
| 112 CATACAGATGATGGTAATACAAACATATGCCGAACTTTTGCTTTTAATTG | |
| 113 TCTTAACAATTTTACATTGCCAGAAAATATATTCTACAGAGGCACCAACA | |
| 114 GACCCAGAACTGATCTTGTATCTGCTGGCTTCCAGGTATCTGTCCTTGTT | |
| 115 AGTGAGAAAAATGTATTGGAAATTCCCATATTAGATGAGATAACATTTAA | |
| 116 TGAGTACGCCCATAAACGAAGCCCATTAAATAAGGATGATAATACAAAGA | |
| 117 TGAGTGAAAGAGATATGGATTCAACTTTCTTGTTGCCACATACACATCTT | |
| 118 TATAAGCCTGACGAGGTAATAACACTCTTATAA | |
| 119 >CG31997-RB | |
| 120 ATGGGTTTCCATTTTCATTTTGATATTTTGCTCCTCATTTTACTCTTAAC | |
| 121 TCTAATAGCTCCTTTTTGTATTGCGGCTGAACAAAAAGTGTTGAAAGATG | |
| 122 AAACTGCCAATGTTGGTGAAATACGAATTTTTAAACGCCTTATTCCTGCT | |
| 123 GATGTTCTGAGAGATTTTCCGGCGATGTGCTTTGCTTCCACTCGATGCGC | |
| 124 TACTGTTGAACCAGGGAAGACTTGGGACTTAACTCCGTTCTGCGGTCGTT | |
| 125 CTACTTGCGTGCAAAATGAGGAAAATGAAACAAAGCTTTTGGAACTAGTA | |
| 126 GAAGACTGTGGCCCATTGCCACTGGCAAACGACAAATGTAAGTTGGACAC | |
| 127 TGAGAAGACAAATAAAACGGCTTCGTTTCCTTACTGCTGCCCCATCTTCA | |
| 128 CATGTGAGCCTGGCGTTGCATTGGAATATCCTGAGGTTGGAAAGGAAAAT | |
| 129 GACAAAAAGAATGTTGAGTGA | |
| 130 >Arl4-RA | |
| 131 ATGGGGGCAACCATGGTAAAACCTCTGGTAAAAAACGGAAATTTTTTAGA | |
| 132 CGCATTGCCTTCTCAGGCAACCCTCCATGTAGTAATGTTAGGCTTGGACT | |
| 133 CTGCGGGGAAAACCACTGCATTATACAGACTTAAGTTCGATCAGTATTTA | |
| 134 AACACGGTGCCGACTATTGGTTTTAATTGCGAAAAAGTTCAAGGTACTAT | |
| 135 TGGTAAGGCTAAAGGAGTTCATTTTCTTGTTTGGGATGTTGGAGGTCAAG | |
| 136 AAAAACTAAGACCTCTTTGGAGAAGCTATACACGCTGCACCGATGGAATT | |
| 137 TTGTTTGTTATCGATTCGGTCGATACGGAACGAATGGAAGAAGCAAAAAT | |
| 138 GGAGTTGATGCGTACCGCTAAATGTCCTGATAATCAGGGTGTTCCAGTGC | |
| 139 TGATATTAGCAAATAAGCAAGATCTTCCAAACGCGTGTGGTGCAATGGAG | |
| 140 CTGGAAAAACTTTTAGGACTGAACGAGCTTTATAACCCAGTGCCGAACAT | |
| 141 ATCGATGCTAACTTGTTCCGACTCTTCTTCCACCATCAATTTAATCGGAT | |
| 142 GTAGCAAGTCAAACCAAAGTATTACAGAAACCTCGTTAACAGAGCAAAGA | |
| 143 TCAAATCACCTGCATTCATCAATGATTCACATTAAACCTGCTCCTGAAAG | |
| 144 TGACGAACAAAGGACTACGTTAAGTGGAGAGGCGTTGTCTACATTCATAT | |
| 145 ATCCGCATTCTGGCAAAGGTTCTGATGTGAAGGACCAAAAAAATTCGCGT | |
| 146 GATGGTAAAAACTGTTTTCATAACAAAAAACATAACAGGACCTTTTCCAA | |
| 147 CTCGATGCACTTTAGGGGGTGGTATATACAACCGACCTGTGCGATAACTG | |
| 148 GCGAGGGACTTCAAGAAGGCCTAGAAGCTCTTTATGATATGATATTGAAA | |
| 149 CGCCGGAAACTTAATAAATCTCATAAGAAAAAACTGTAG | |
| 150 >CG2316-RA | |
| 151 ATGAGTGTCCTATCCAAATATGTTGACTGTTTTGCAGAAAAATGTGAACA | |
| 152 TAATGGGCTAACAAAACACGTTTTCAGCTATGCTCTTGTGACTAGTGCTA | |
| 153 TATTGGCACTTACTATCAAGGTGACTATCCCCTACGCGAAGAAAGGAATA | |
| 154 ACTCAAAATGGAAAACCCAAAGTCCACAATGGGACACTTACACCATTGGA | |
| 155 AGCAGATATTTCAGAGGAGGATTTAAAGCTAGCGGAGGCCGAAAAGTTGT | |
| 156 TAGTTGCTCAGCAGCAAAAAAAAAAATCAAATGATTTTGTTGAGCCAGGA | |
| 157 CTAAACCAAGAATTTTTGAAACAACTGAAAATGCTTTCAAAAATAATGAT | |
| 158 CCCACAGACCTTATGTTACGAAACTGGATTGCTGGCTGTTCATACATTTT | |
| 159 GCCTAATTTCTCGCACATTTCTTAGTATTTATGTGGCTGCTTTGGAGGGA | |
| 160 GCCCTTGTAAAATTCATAGTACGAAAAGACGTTAAACAATTTGCTCTTGT | |
| 161 ATTACTGAAATGGTTCGGGATTGCTATCCCTGCTACGTTTGTTAATTCCA | |
| 162 TGATACGGTTTCTTGAAAGTAAACTTGCTCTGGCTTTTCGAACTCGACTG | |
| 163 GTACGTCACTCATATCGTCTTTACTTTAAAAACCAAAATTATTATAGAGT | |
| 164 ATCGAATTTGGATGGACGCATTGAAAATGCGGATCACAGACTTACCGAAG | |
| 165 ATATTTCCGTGTTCGCTAGCTCTGTAGCTCATTTGTATAGTAGCCTGACA | |
| 166 AAACCATGTTTCGATCTAATGCTTATTGGCTTGGCATTGATGAGATCCTC | |
| 167 TAGAAAAATGAAAGCTAACATTATAACCGGACCGGCTTTATCTGTTGGTG | |
| 168 TTATTGCTCTAACAGCCCATATATTACGAATCGTGTCACCGAAGTTTGGA | |
| 169 CAGTTGGTATCGGAAGAAGCCAATAGGTATGGCTACTTGAGGCACATTCA | |
| 170 CTCCCGCATAATAACTAATGCAGAAGAAATCGCCTTTTACGGTGGTCACA | |
| 171 AAGTGGAGATGCAGCAGCTACGGCAGGCATACAACCGTCTAGTAAATCAA | |
| 172 ATGACTACAATTTTTAACCAAAAACTTTGGTTTATTATGCTTGAACAATT | |
| 173 TTTTATGAAATATGTTTGGTCCGGTACTGGAATGATTATGGTGTCACTTC | |
| 174 CTATTCTGACAGGCAGTGACGTAGGATCTGCATCAAAGCCCGACTCGGCC | |
| 175 ATTACGGAGTCGCGTGTTAGCGAACGTACGCAGTATTTAACAACAGCTAG | |
| 176 AAATTTACTAATTTCTGCAGCAGACGCTATTGAGCGATTGATGTCTTCTT | |
| 177 ACAAAGAAATTGTGTCGCTTGCTGGATACACTTATCGCGTGGCTGGCATG | |
| 178 ATGGATGTGTTCGAGGAAACTGCACAGGGACTCTACTGCAAGGCGAGTGT | |
| 179 AATAGATAACAATCAGTCAAAAGGAATTATAGAGCACCGTAACGGAAAGC | |
| 180 CAATAGCAAAGGGTCGCATTATTTACTCAGATGATCCGGAAAATATGTCA | |
| 181 ATAAACTTACGTGCAGTGCCAGTAGTGACACCAAACTGTGATATAGTTGT | |
| 182 ACCGAAACTTACATTGTGCATCGAGCCTGGGGTGCATTTGTTAATAACTG | |
| 183 GGCCGAACGGTTGTGGTAAATCCAGCTTGTTTAGAATACTAAGTGGTCTT | |
| 184 TGGCCCATATACGCTGGAGAATTGCAAATACCGCGGCCCGTAAAAGATAT | |
| 185 TCCTTGTATGTTTTACATTCCACAACGTCCATACATGTCAATTGGTAGTC | |
| 186 TTTGCGACCAAATTATATACCCCGACACACGGGATGATATGAAACGCAAA | |
| 187 GAAATATCTGAAAATGAGTTAAGATGCATTTTGAAGTTGGTCAGCCTTGA | |
| 188 ACACATCGCCCAACGTGATAGTTTTGACGTTGTTCGTGATTGGAAGGATA | |
| 189 TATTATCTGGAGGTGAAAAACAACGTATGGCGATAGCTCGCTTGTTTTAC | |
| 190 CACAAGCCACGTTATGCCCTACTTGATGAATGTACGAGCGCAGTGTCTAT | |
| 191 AGACGTTGAAAGCTCAATATATGAAATTGCTAAAGGCATGGGAATTACGC | |
| 192 TGTTGACTATAACACACAGGCCTACCTTATGGAAATACCACACACATATA | |
| 193 TTGGAGTTCGACGGCCTTGGCAACTGGCAGTTTAGAAAAATGAATGAAGA | |
| 194 TGAGCAACAAAAGGAACTATTCCTTTCTTAG |