Mercurial > repos > ximgchess > hedm_lattice_parameter_correction

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"planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit a8f7424061c14ed403820ebddcda94a38006c699"
author ximgchess
date Thu, 19 May 2022 17:38:53 +0000
parents 59453ad6e219
children
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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4 analysis_name: analysis
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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6 multiprocessing: -1
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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8 material:
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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9 definitions: materials_h5.h5
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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10 active: ruby
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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11 dmin: 1.0 # defaults to 1.0 angstrom
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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12 tth_width: 0.25 # defaults to 0.25 degrees
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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13 min_sfac_ratio: 0.05 # min percentage of max |F|^2 to exclude; default None
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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15 image_series:
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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16 format: frame-cache
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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17 data:
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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18 - file: imageseries/mruby-0129_000004_ff2_000012-cachefile.npz
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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19 args: {}
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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20 panel: ff2 # must match detector key
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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21 - file: imageseries/mruby-0129_000004_ff1_000012-cachefile.npz
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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22 args: {}
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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23 panel: ff1 # must match detector key
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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25 instrument: dexelas_id3a_20200130.yml
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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28 find_orientations:
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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29 orientation_maps:
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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30 # A file name must be specified. If it doesn't exist, one will be created
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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31 file: analysis_ruby_eta-ome_maps.npz
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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33 fit_grains:
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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34 do_fit: true # if false, extracts grains but doesn't fit. defaults to true
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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35 # estimate: null
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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36 npdiv: 2 # number of polar pixel grid subdivisions, defaults to 2
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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37 threshold: 25
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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39 tolerance:
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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40 tth: [3.0] # tolerance lists must be identical length
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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41 eta: [2.0]
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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42 omega: [1.0]
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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44 refit: [1.5,1.0]
59453ad6e219 "planemo upload for repository https://github.com/ximg-chess/galaxytools/tools/hedm_lattice_parameter_correction commit 420bbed5449757711b88200208bb050e0797f5a3"
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45 tth_max: true # true, false, or a non-negative value, defaults to true
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