# HG changeset patch
# User ximgchess
# Date 1682365709 0
# Node ID 0473fdc7f9b09113529b5aa5197169655f4441c5
# Parent  54d0adb79293edb2bb2998d3e975f52658f080df
planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 919e80fa3f8a9160766ff4d2c6b8956ec5553ad3-dirty

diff -r 54d0adb79293 -r 0473fdc7f9b0 tomo/tomo_combine.xml
--- a/tomo/tomo_combine.xml	Mon Apr 24 19:45:33 2023 +0000
+++ b/tomo/tomo_combine.xml	Mon Apr 24 19:48:29 2023 +0000
@@ -9,7 +9,7 @@
         mkdir tomo_combine_plots;
         $__tool_directory__/../pip_install.sh 'certif-pyspec==1.5.3' &&
         cp $input_file reconstruced.nex &&
-        cp $tool_config combine.yaml
+        cp $tool_config combine.yaml &&
         CHAP --config 
         $__tool_directory__/pipeline_combine.yaml
         ]]>
diff -r 54d0adb79293 -r 0473fdc7f9b0 tomo/tomo_find_center.xml
--- a/tomo/tomo_find_center.xml	Mon Apr 24 19:45:33 2023 +0000
+++ b/tomo/tomo_find_center.xml	Mon Apr 24 19:48:29 2023 +0000
@@ -9,7 +9,7 @@
         mkdir tomo_find_center_plots;
         $__tool_directory__/../pip_install.sh 'certif-pyspec==1.5.3' &&
         cp $input_file reduced.nex &&
-        cp $tool_config find_center.yaml
+        cp $tool_config find_center.yaml &&
         CHAP --config 
         $__tool_directory__/pipeline_find_center.yaml
         ]]>
diff -r 54d0adb79293 -r 0473fdc7f9b0 tomo/tomo_reconstruct.xml
--- a/tomo/tomo_reconstruct.xml	Mon Apr 24 19:45:33 2023 +0000
+++ b/tomo/tomo_reconstruct.xml	Mon Apr 24 19:48:29 2023 +0000
@@ -10,7 +10,7 @@
         $__tool_directory__/../pip_install.sh 'certif-pyspec==1.5.3' &&
         cp $input_file reduced.nex &&
         cp $center_file centers.yaml &&
-        cp $tool_config reconstruct.yaml
+        cp $tool_config reconstruct.yaml &&
         CHAP --config 
         $__tool_directory__/pipeline_reconstruct.yaml
         ]]>