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view tomo/pipeline_find_center.yaml @ 94:5479b4b4f0e6 draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit b682c580a95bebc59bc33128973cee4eac8362c7-dirty
author ximgchess
date Wed, 24 May 2023 14:41:10 +0000
parents c63315c31cef
children 3283cbddcc1d
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pipeline:

  # Find rotation axis centers for the tomography stacks
  - common.MultipleReader:
      readers:
        - NexusReader:
            filename: reduced.nex
        - YAMLReader:
            filename: find_center.yaml
            schema: TomoFindCenterConfig
  - tomo.TomoDataProcessor:
      output_folder: tomo_find_center_plots
      save_figs: 'only'
  - common.YAMLWriter:
      filename: output.yaml
      force_overwrite: true