Mercurial > repos > ximgchess > chap_test_20230411

diff saxswaxs/pipeline.yaml @ 0:47d2a1f087d1 draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit fe909397cd829fe9a784a810d0264ab1751ae090-dirty
author ximgchess
date Tue, 11 Apr 2023 14:41:16 +0000
parents
children a560d5143348
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/saxswaxs/pipeline.yaml	Tue Apr 11 14:41:16 2023 +0000
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+pipeline:
+
+  # Download example data
+  - common.URLReader:
+      url: https://gitlab01.classe.cornell.edu/api/v4/projects/308/repository/files/saxswaxs%2frawdata_test_1d.tar/raw?ref=main
+      headers:
+        PRIVATE-TOKEN: # your token here
+  - common.URLResponseProcessor
+  - common.ExtractArchiveWriter:
+      filename: .
+
+  # Collect map data
+  - common.YAMLReader:
+      filename: map.yaml
+      schema: MapConfig
+  - common.MapProcessor
+  - common.NexusWriter:
+      filename: map_specdata.nxs
+      force_overwrite: true
+
+  # Integrate map detetcor data
+  - common.MultipleReader:
+      readers:
+        - YAMLReader:
+            filename: map.yaml
+            schema: MapConfig
+        - YAMLReader:
+            filename: integration.yaml
+            schema: IntegrationConfig
+  - common.IntegrateMapProcessor
+  - common.NexusWriter:
+      filename: map_reduceddata.nxs
+      force_overwrite: true