comparison tomo/tomo_reduce.xml @ 33:f35145a1487c draft

planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 3e8c1c54d5e12fdbc4f6c5cdae88b6d054db7c45-dirty

32:21c5d24fb8d8

    </macros>
    <expand macro="requirements"/>
    <command detect_errors="exit_code">
        <![CDATA[
        mkdir tomo_reduce_plots;
        pip --exists-action i install certif-pyspec==1.5.3 &&
        #if str($map.type_selector) == "yaml"
            cp $input_file map.yaml &&
            cat $__tool_directory__/andor2.yaml $tool_config > reduce.yaml &&
        #else
            cp $input_file setup.nex &&

33:f35145a1487c

    </macros>
    <expand macro="requirements"/>
    <command detect_errors="exit_code">
        <![CDATA[
        mkdir tomo_reduce_plots;
        #if str($map.type_selector) == "yaml"
            cp $input_file map.yaml &&
            cat $__tool_directory__/andor2.yaml $tool_config > reduce.yaml &&
        #else
            cp $input_file setup.nex &&