Mercurial > repos > ximgchess > chap_test_20230411

comparison tomo/tomo_find_center.xml @ 72:efb4a65f46eb draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 919e80fa3f8a9160766ff4d2c6b8956ec5553ad3-dirty
author ximgchess
date Mon, 24 Apr 2023 19:49:26 +0000
parents 0473fdc7f9b0
children 0476dee34886
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71:0473fdc7f9b0 72:efb4a65f46eb
5 </macros> 5 </macros>
6 <expand macro="requirements"/> 6 <expand macro="requirements"/>
7 <command detect_errors="exit_code"> 7 <command detect_errors="exit_code">
8 <![CDATA[ 8 <![CDATA[
9 mkdir tomo_find_center_plots; 9 mkdir tomo_find_center_plots;
10 $__tool_directory__/../pip_install.sh 'certif-pyspec==1.5.3' &&
11 cp $input_file reduced.nex && 10 cp $input_file reduced.nex &&
12 cp $tool_config find_center.yaml && 11 cp $tool_config find_center.yaml &&
13 CHAP --config 12 CHAP --config
14 $__tool_directory__/pipeline_find_center.yaml 13 $__tool_directory__/pipeline_find_center.yaml
15 ]]> 14 ]]>