Mercurial > repos > ximgchess > chap_test_20230411
comparison tomo/tomo_reduce.xml @ 112:c610d3babadc draft
planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 6697892ecc504b00077394d0c167431ec3ac12f7-dirty
| author | ximgchess |
|---|---|
| date | Fri, 26 May 2023 14:41:01 +0000 |
| parents | e319f10f14c2 |
| children | dc353f9c7d9e |
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| 111:e319f10f14c2 | 112:c610d3babadc |
|---|---|
| 9 mkdir tomo_reduce_plots; | 9 mkdir tomo_reduce_plots; |
| 10 #if str($map.type_selector) == "yaml" | 10 #if str($map.type_selector) == "yaml" |
| 11 cp $input_file map.yaml && | 11 cp $input_file map.yaml && |
| 12 #if str($map.detector.type_selector) == "from_file" | 12 #if str($map.detector.type_selector) == "from_file" |
| 13 cat $map.detector.detector_file $tool_config > reduce.yaml && | 13 cat $map.detector.detector_file $tool_config > reduce.yaml && |
| 14 #elif str($map.detector.type_selector) == "manual" | |
| 15 cat $tool_config > reduce.yaml && | |
| 14 #else | 16 #else |
| 15 cat $__tool_directory__/$map.detector.type_selector $tool_config > reduce.yaml && | 17 cat $__tool_directory__/$map.detector.type_selector $tool_config > reduce.yaml && |
| 16 #end if | 18 #end if |
| 17 #else | 19 #else |
| 18 cp $input_file setup.nex && | 20 cp $input_file setup.nex && |