Mercurial > repos > ximgchess > chap_test_20230411

comparison tomo/tomo_combine.xml @ 71:0473fdc7f9b0 draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 919e80fa3f8a9160766ff4d2c6b8956ec5553ad3-dirty
author ximgchess
date Mon, 24 Apr 2023 19:48:29 +0000
parents 3b1dbe3fb91b
children efb4a65f46eb
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70:54d0adb79293 71:0473fdc7f9b0
7 <command detect_errors="exit_code"> 7 <command detect_errors="exit_code">
8 <![CDATA[ 8 <![CDATA[
9 mkdir tomo_combine_plots; 9 mkdir tomo_combine_plots;
10 $__tool_directory__/../pip_install.sh 'certif-pyspec==1.5.3' && 10 $__tool_directory__/../pip_install.sh 'certif-pyspec==1.5.3' &&
11 cp $input_file reconstruced.nex && 11 cp $input_file reconstruced.nex &&
12 cp $tool_config combine.yaml 12 cp $tool_config combine.yaml &&
13 CHAP --config 13 CHAP --config
14 $__tool_directory__/pipeline_combine.yaml 14 $__tool_directory__/pipeline_combine.yaml
15 ]]> 15 ]]>
16 </command> 16 </command>
17 <configfiles> 17 <configfiles>