# HG changeset patch # User wolma # Date 1571214281 14400 # Node ID bb74adafc98fb982a6fc9eb0ff79f8196438e8a3 # Parent 039890bdcb62c84ed3b8642e2789ef47b8ee0646 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 93138516106c74b1ccc70d2d946e6eaa29c7c1a3-dirty diff -r 039890bdcb62 -r bb74adafc98f data_manager/rna_star_index_builder.py --- a/data_manager/rna_star_index_builder.py Wed Oct 16 03:33:53 2019 -0400 +++ b/data_manager/rna_star_index_builder.py Wed Oct 16 04:24:41 2019 -0400 @@ -34,7 +34,7 @@ "value": args.value, "dbkey": args.dbkey, "name": args.name, - "subdir": args.subdir, + "path": args.subdir, "with_gene_model": with_gene_model, "version": args.index_version } diff -r 039890bdcb62 -r bb74adafc98f data_manager_conf.xml --- a/data_manager_conf.xml Wed Oct 16 03:33:53 2019 -0400 +++ b/data_manager_conf.xml Wed Oct 16 04:24:41 2019 -0400 @@ -12,9 +12,9 @@ out_file.extra_files_path is used as base by default if no source, eg for type=directory, then refers to base --> - rnastar/${version}/${dbkey}/${value}/${subdir} + rnastar/${version}/${dbkey}/${value}/${path} - ${GALAXY_DATA_MANAGER_DATA_PATH}/rnastar/${version}/${dbkey}/${value}/${subdir} + ${GALAXY_DATA_MANAGER_DATA_PATH}/rnastar/${version}/${dbkey}/${value}/${path} abspath