Mercurial > repos > wolma > rnastar_index_builder
view data_manager_conf.xml @ 4:039890bdcb62 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_star_index_builder commit 93138516106c74b1ccc70d2d946e6eaa29c7c1a3-dirty
author | wolma |
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date | Wed, 16 Oct 2019 03:33:53 -0400 |
parents | 80bbca356b76 |
children | bb74adafc98f |
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<?xml version="1.0"?> <data_managers> <data_manager tool_file="data_manager/rna_star_index_builder.xml" id="rna_star_index_builder" version="0.0.6"> <data_table name="rnastar_index2_versioned"> <output> <column name="value" /> <column name="dbkey" /> <column name="name" /> <column name="path" output_ref="out_file" > <move type="directory" relativize_symlinks="True"> <!-- <source>${path}</source> out_file.extra_files_path is used as base by default if no source, eg for type=directory, then refers to base --> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">rnastar/${version}/${dbkey}/${value}/${subdir}</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/rnastar/${version}/${dbkey}/${value}/${subdir}</value_translation> <value_translation type="function">abspath</value_translation> </column> <column name="with_gene_model" /> <column name="version" /> </output> </data_table> </data_manager> </data_managers>