comparison snpeff_genomes.xml @ 0:7da2c9654a83 draft default tip

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0:7da2c9654a83

<tool id="snpeff_genomes" name="List Installed SnpEff Genomes">
  <description>Checks the local SnpEff installation to compile a list of currently installed genomes</description>
  <requirements>
    <requirement type="package" version="3.4.1">python3</requirement>
    <requirement type="package" version="0.1.3_9af04e0e9125">MiModD</requirement>
  </requirements>
  <command>
  	mimodd snpeff_genomes -o $outputfile
  </command>
  <outputs>
    <data name="outputfile" format="tabular" />
  </outputs>
<help>
.. class:: infomark

**What it does**

When executed this tool searches the host machine's SnpEff installation for properly registered and installed
genome annotation files. The resulting list is added as a plain text file to your history for use with the *Variant Annotation* Tool.

</help>

</tool>