Mercurial > repos > willmclaren > ensembl_vep
comparison variant_effect_predictor/Bio/Biblio/TechReport.pm @ 0:21066c0abaf5 draft
Uploaded
author | willmclaren |
---|---|
date | Fri, 03 Aug 2012 10:04:48 -0400 |
parents | |
children |
comparison
equal
deleted
inserted
replaced
-1:000000000000 | 0:21066c0abaf5 |
---|---|
1 # $Id: TechReport.pm,v 1.6 2002/10/22 07:45:11 lapp Exp $ | |
2 # | |
3 # BioPerl module for Bio::Biblio::TechReport | |
4 # | |
5 # Cared for by Martin Senger <senger@ebi.ac.uk> | |
6 # For copyright and disclaimer see below. | |
7 | |
8 # POD documentation - main docs before the code | |
9 | |
10 =head1 NAME | |
11 | |
12 Bio::Biblio::TechReport - Representation of a technical report | |
13 | |
14 =head1 SYNOPSIS | |
15 | |
16 $obj = new Bio::Biblio::TechReport | |
17 (-authors => [ | |
18 new Bio::Biblio::Person (-lastname => 'Hasek'), | |
19 new Bio::Biblio::Person (-lastname => 'Jagr'), | |
20 new Bio::Biblio::Organisation (-name => 'NHL'), | |
21 ] | |
22 -title => 'Pinned in the corner'); | |
23 | |
24 =head1 DESCRIPTION | |
25 | |
26 A storage object for a technical report. | |
27 See its place in the class hierarchy in | |
28 http://industry.ebi.ac.uk/openBQS/images/bibobjects_perl.gif | |
29 | |
30 =head2 Attributes | |
31 | |
32 There are no specific attributes in this class | |
33 (however, you can set and get all attributes defined in the parent classes). | |
34 | |
35 =head1 SEE ALSO | |
36 | |
37 =over | |
38 | |
39 =item * | |
40 | |
41 OpenBQS home page: http://industry.ebi.ac.uk/openBQS | |
42 | |
43 =item * | |
44 | |
45 Comments to the Perl client: http://industry.ebi.ac.uk/openBQS/Client_perl.html | |
46 | |
47 =back | |
48 | |
49 =head1 FEEDBACK | |
50 | |
51 =head2 Mailing Lists | |
52 | |
53 User feedback is an integral part of the evolution of this and other | |
54 Bioperl modules. Send your comments and suggestions preferably to | |
55 the Bioperl mailing list. Your participation is much appreciated. | |
56 | |
57 bioperl-l@bioperl.org - General discussion | |
58 http://bioperl.org/MailList.shtml - About the mailing lists | |
59 | |
60 =head2 Reporting Bugs | |
61 | |
62 Report bugs to the Bioperl bug tracking system to help us keep track | |
63 of the bugs and their resolution. Bug reports can be submitted via | |
64 email or the web: | |
65 | |
66 bioperl-bugs@bioperl.org | |
67 http://bugzilla.bioperl.org/ | |
68 | |
69 =head1 AUTHORS | |
70 | |
71 Heikki Lehvaslaiho (heikki@ebi.ac.uk), | |
72 Martin Senger (senger@ebi.ac.uk) | |
73 | |
74 =head1 COPYRIGHT | |
75 | |
76 Copyright (c) 2002 European Bioinformatics Institute. All Rights Reserved. | |
77 | |
78 This module is free software; you can redistribute it and/or modify | |
79 it under the same terms as Perl itself. | |
80 | |
81 =head1 DISCLAIMER | |
82 | |
83 This software is provided "as is" without warranty of any kind. | |
84 | |
85 =cut | |
86 | |
87 | |
88 # Let the code begin... | |
89 | |
90 | |
91 package Bio::Biblio::TechReport; | |
92 use strict; | |
93 use vars qw(@ISA); | |
94 | |
95 use Bio::Biblio::Ref; | |
96 | |
97 @ISA = qw( Bio::Biblio::Ref); | |
98 | |
99 # | |
100 # a closure with a list of allowed attribute names (these names | |
101 # correspond with the allowed 'get' and 'set' methods); each name also | |
102 # keep what type the attribute should be (use 'undef' if it is a | |
103 # simple scalar) | |
104 # | |
105 { | |
106 my %_allowed = ( | |
107 ); | |
108 | |
109 # return 1 if $attr is allowed to be set/get in this class | |
110 sub _accessible { | |
111 my ($self, $attr) = @_; | |
112 exists $_allowed{$attr} or $self->SUPER::_accessible ($attr); | |
113 } | |
114 | |
115 # return an expected type of given $attr | |
116 sub _attr_type { | |
117 my ($self, $attr) = @_; | |
118 if (exists $_allowed{$attr}) { | |
119 return $_allowed{$attr}; | |
120 } else { | |
121 return $self->SUPER::_attr_type ($attr); | |
122 } | |
123 } | |
124 } | |
125 | |
126 | |
127 1; | |
128 __END__ |