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Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author vipints
date Tue, 07 Jun 2011 17:43:04 -0400
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b4f83e06d7bf Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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1 INTRODUCTION
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b4f83e06d7bf Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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3 A tool for converting data in wiggle fixedStep or variableStep format to four column bedGraph format
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b4f83e06d7bf Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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5 CONTENTS
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7 galaxy: Contains tool configuration file in *.xml format.
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9 Wig2bedGraph.xml
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11 t: Test data set. (move to your galaxy root folder/test-data/)
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b4f83e06d7bf Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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13 You may need to move the test files into your test-data directory so galaxy can find them.
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14 If you want to run the functional tests eg as:
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b4f83e06d7bf Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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16 sh run_functional_tests.sh -id fml_wig2bed
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18 script: Perl based script.
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20 wig2bedGraph_converter.pl: Read data in wiggle fixedStep and variableStep and convert to bedGraph format.
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22 REQUIREMENTS
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24 Perl
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26 COMMENTS/QUESTIONS
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28 I can be reached at vipin.ts@tuebingen.mpg.de
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30 LICENSE
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31
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32 Copyright (C) 2010 Friedrich Miescher Laboratory of the Max Planck Society
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33
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34 This program is free software; you can redistribute it and/or modify
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35 it under the terms of the GNU General Public License as published by
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36 the Free Software Foundation; either version 3 of the License, or
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37 (at your option) any later version.
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39 COURTESY
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40
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41 Galaxy Team.