# HG changeset patch
# User vimalkumarvelayudhan
# Date 1511522234 18000
# Node ID 45f5550a0aa36da68e8db89a61e6ffa1bdfaf300
# Parent  415fc38fbae15e83851ff94c79e14b4c1c21a034
Uploaded

diff -r 415fc38fbae1 -r 45f5550a0aa3 ribocount.xml
--- a/ribocount.xml	Fri Nov 24 06:16:53 2017 -0500
+++ b/ribocount.xml	Fri Nov 24 06:17:14 2017 -0500
@@ -1,13 +1,13 @@
-<tool id="ribocount" name="ribocount" version="0.2.5">
+<tool id="ribocount" name="ribocount" version="0.3.1">
     <description>Get read counts for all transcripts in an alignment (BAM)
     </description>
     <requirements>
-        <requirement type="package" version="0.2.5">riboplot</requirement>
+        <requirement type="package" version="0.3.1">riboplot</requirement>
     </requirements>
     <stdio>
         <exit_code range="1:"  level="fatal" description="Error" />
     </stdio>
-    <command>python \${RIBOPLOT_PATH}/ribocount
+    <command>ribocount
     --ribo_file "${ribo_file}"
     --transcriptome_fasta "${transcriptome_fasta}"
     --read_length "${read_length}"