Mercurial > repos > vimalkumarvelayudhan > riboplot

comparison docs/readme.rst @ 7:096c6bbf4a04

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Bugfix: (ribocounts) Read length was sent as rnafile argument in check_optional_arguments
author Vimalkumar Velayudhan <vimal@biotechcoder.com>
date Thu, 13 Aug 2015 15:03:20 +0100
parents cef780bcce01
children 8964641b04ef
comparison
equal deleted inserted replaced
6:2ffa8172dce1 7:096c6bbf4a04
1 ../README.rst 1 ===============================
2 RiboPlot
3 ===============================
4
5 .. image:: https://img.shields.io/travis/vimalkumarvelayudhan/riboplot.svg
6 :target: https://travis-ci.org/vimalkumarvelayudhan/riboplot
7
8 .. image:: https://img.shields.io/pypi/v/riboplot.svg
9 :target: https://pypi.python.org/pypi/riboplot
10
11
12 RiboPlot includes programs to plot and output Ribo-Seq read counts from an alignment file (BAM format).
13
14 There are two programs in the package:
15
16 **riboplot**
17 Plot and output read counts (csv) for a single transcript.
18
19 **ribocount**
20 Output read counts for all transcripts in an alignment.
21
22 For help on using these programs, please refer to :doc:`usage`.
23
24
25 Free software: BSD license.
26
27 Documentation: https://riboplot.readthedocs.org.
28