# HG changeset patch
# User trinity_ctat
# Date 1529690879 14400
# Node ID ebee170e977b34ef25bc218143b1f55c53838b82
# Parent  2847714632d9c8d8f95fab98a6723f434efa132c
Uploaded

diff -r 2847714632d9 -r ebee170e977b ctat_lncrna.xml
--- a/ctat_lncrna.xml	Fri Jun 22 12:33:26 2018 -0400
+++ b/ctat_lncrna.xml	Fri Jun 22 14:07:59 2018 -0400
@@ -11,9 +11,9 @@
      --config "${assembly.fields.path}" 
      #end if
 
-     --bedtools "$CONDA_DEFAULT_ENV/bin" 
-     --lastz "$CONDA_DEFAULT_ENV/bin"
-     --liftover "$CONDA_DEFAULT_ENV/bin"
+     --bedtools "${CONDA_DEFAULT_ENV}/bin" 
+     --lastz "${CONDA_DEFAULT_ENV}/bin"
+     --liftover "${CONDA_DEFAULT_ENV}/bin"
 
      #if str($assembly) != "":
          --assembly "${assembly.fields.value}"