Mercurial > repos > trinity_ctat > ctat_genome_resource_libs_data_manager_3
changeset 4:c372930aaba1 draft
Uploaded
| author | trinity_ctat |
|---|---|
| date | Tue, 01 May 2018 13:49:00 -0400 |
| parents | d5f99ab85747 |
| children | 7f1257532b6f |
| files | data_manager/add_ctat_resource_lib.py |
| diffstat | 1 files changed, 6 insertions(+), 0 deletions(-) [+] |
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--- a/data_manager/add_ctat_resource_lib.py Tue May 01 13:32:58 2018 -0400 +++ b/data_manager/add_ctat_resource_lib.py Tue May 01 13:49:00 2018 -0400 @@ -83,6 +83,8 @@ # The mouse genome option is not handled correctly yet options.append((filename, url, i == 0)) # return a tuple of the urls + print "The list being returned as options is:" + print "{:s}\n".format(str(options)) return options # The following was used by the example program to get input parameters through the json. @@ -124,6 +126,8 @@ # Since it doesn't always do the download, the function returns whether download occurred. lib_was_downloaded = False + print "In download_from_BroadInst(). The source_url is:\n\t{:s}".format(str(source)) + # Get the root filename of the Genome Directory. src_filename = source.split("/")[-1] root_genome_dirname = src_filename.split(".")[0] @@ -401,6 +405,8 @@ # target_directory = params['output_data'][0]['extra_files_path'] # os.mkdir(target_directory) + print "The value of source_url argument is:\n\t{:s}".format(str(args.source_url)) + # FIX - not sure the lib_was_downloaded actually serves a purpose... lib_was_downloaded = False download_has_source_data = False