# HG changeset patch # User trinity_ctat # Date 1541533899 18000 # Node ID f6be67154ebb1a1de38c5cc4d264e57d5bc4b1df # Parent 57f0701de47e9b68aa2f548680c1ce7bb117f187 Uploaded diff -r 57f0701de47e -r f6be67154ebb data_manager/add_ctat_resource_lib.py --- a/data_manager/add_ctat_resource_lib.py Tue Nov 06 14:47:43 2018 -0500 +++ b/data_manager/add_ctat_resource_lib.py Tue Nov 06 14:51:39 2018 -0500 @@ -1564,12 +1564,13 @@ # The line is not a comment, so parse it. items = [item.strip() for item in line.split("\t")] print items - # data_table_entry = dict(value=items[0], name=items[1], code=items[2], date=items[3]) - # data_manager_dict['data_tables']['ctat_cravat_tissues'].append(data_table_entry) + data_table_entry = dict(value=items[0], name=items[1], code=items[2], date=items[3]) + data_manager_dict['data_tables']['ctat_cravat_tissues'].append(data_table_entry) # Temporarily the output file's dictionary is written for debugging: print "The dictionary for the output file is:\n\t{:s}".format(str(data_manager_dict)) sys.stdout.flush() + exit 1 # Save info to json file. This is used to transfer data from the DataManager tool, to the data manager, # which then puts it into the correct .loc file (I think). # One can comment out the following line when testing without galaxy package.