# HG changeset patch
# User trinity_ctat
# Date 1540518291 14400
# Node ID d4b5258f244b8c7346361e6fec147414236f162b
# Parent  fb13fae2c8737d61959d70a30d30e9aa2b736bd6
Uploaded

diff -r fb13fae2c873 -r d4b5258f244b data_manager/add_ctat_resource_lib.py
--- a/data_manager/add_ctat_resource_lib.py	Thu Oct 25 21:18:27 2018 -0400
+++ b/data_manager/add_ctat_resource_lib.py	Thu Oct 25 21:44:51 2018 -0400
@@ -730,6 +730,7 @@
         command = "gmap_build -D {:s}/ -d ref_genome.fa.gmap -k 13 {:s}/ref_genome.fa 2>&1".format( \
         	   genome_build_directory, genome_build_directory)
         print "Doing a gmap_build with the following command:\n\t{:s}\n".format(command)
+        sys.stdout.flush()
         try: # to send the gmap_build command.
             subprocess.check_call(command, shell=True)
         except subprocess.CalledProcessError: