# HG changeset patch
# User trinity_ctat
# Date 1513371208 18000
# Node ID 3bb91cebec5c59f1ed5648ff681bb984a155e777
# Parent  abdf6aad584ad89d482b5f85fe7efcfc7cd5bf27
Uploaded

diff -r abdf6aad584a -r 3bb91cebec5c data_manager/add_ctat_ref_lib.py
--- a/data_manager/add_ctat_ref_lib.py	Tue Dec 12 15:47:25 2017 -0500
+++ b/data_manager/add_ctat_ref_lib.py	Fri Dec 15 15:53:28 2017 -0500
@@ -78,11 +78,13 @@
         genome_name = "GRCh38_gencode_v26"
     else:
         genome_name = args.genome_name
-
+    # Set the value to the basename of the directory path minus the extension. 
+    # FIX - Need to make sure is unique. This is not good way to do it. Just doing it this way now for testing.
+    table_entry_value = os.path.basename(ctat_genome_resource_lib_path).split(".")[0]
     data_manager_dict = {}
     data_manager_dict['data_tables'] = {}
     data_manager_dict['data_tables']['ctat_genome_ref_libs'] = []
-    data_table_entry = dict(value="CTAT_RESOURCE_LIB", name=genome_name, path=ctat_genome_resource_lib_path)
+    data_table_entry = dict(value=table_entry_value, name=genome_name, path=ctat_genome_resource_lib_path)
     data_manager_dict['data_tables']['ctat_genome_ref_libs'].append(data_table_entry)
 
     # Save info to json file. This is used to transfer data from the DataManager tool, to the data manager,
diff -r abdf6aad584a -r 3bb91cebec5c data_manager/add_ctat_ref_lib.xml
diff -r abdf6aad584a -r 3bb91cebec5c data_manager_conf.xml