# HG changeset patch
# User trinity_ctat
# Date 1530544940 14400
# Node ID 57bdc1772c5ba25d1816b6a93a3dfed2c4a17f6c
# Parent  b37d57c8ce7e15bf419d76f78d672de0d329505d
Uploaded

diff -r b37d57c8ce7e -r 57bdc1772c5b ctat_analyze_differential_expression.py
--- a/ctat_analyze_differential_expression.py	Fri Jun 29 14:54:40 2018 -0400
+++ b/ctat_analyze_differential_expression.py	Mon Jul 02 11:22:20 2018 -0400
@@ -108,11 +108,11 @@
 # diffExpr.P0.001_C2.0.matrix
 run_command("mv " + origMatrixName + " diffExpr.matrix")
 
-SampleCorName= "diffExpr.P" + Pvalue + "_" + "C" + Cvalue + ".matrix.log2.sample_cor.dat"
+SampleCorName= "diffExpr.P" + Pvalue + "_" + "C" + Cvalue + ".matrix.log2.centered.sample_cor.dat"
 # diffExpr.P0.001_C2.0.matrix.log2.sample_cor.dat
-run_command("mv " + SampleCorName + " diffExpr.matrix.log2.sample_cor.dat")
+run_command("mv " + SampleCorName + " diffExpr.matrix.log2..sample_cor.dat")
 
-CorMatrix= "diffExpr.P" + Pvalue + "_" + "C" + Cvalue + ".matrix.log2.sample_cor_matrix.pdf"
+CorMatrix= "diffExpr.P" + Pvalue + "_" + "C" + Cvalue + ".matrix.log2.centered.sample_cor_matrix.pdf"
 # diffExpr.P0.001_C2.0.matrix.log2.sample_cor_matrix.pdf
 run_command("mv " + CorMatrix + " diffExpr.matrix.log2.sample_cor_matrix.pdf")