# HG changeset patch
# User tomnl
# Date 1560869926 14400
# Node ID ad24f23e7d532ae583713872898db4f4717a7b8a
# Parent  1a77ed3c94b7a4fc1e6d1e36d6dca946e5edde9e
planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit 14eafbdb65f491713d1314d77c454defd137c392

diff -r 1a77ed3c94b7 -r ad24f23e7d53 createDatabase.R
--- a/createDatabase.R	Tue Jun 18 10:39:15 2019 -0400
+++ b/createDatabase.R	Tue Jun 18 10:58:46 2019 -0400
@@ -156,10 +156,10 @@
   }
 
   xset@peaks <- as.matrix(plyr::ddply(data.frame(xset@peaks), ~ sample, convert2Raw, xset=xset))
-
+  closeAllConnections()
   # Saves the EICS into the previously created database
   px <- msPurity::purityX(xset, saveEIC = TRUE,
-                           cores=2, sqlitePth=dbPth,
+                           cores=1, sqlitePth=dbPth,
                            rtrawColumns = TRUE)
 
 }