Mercurial > repos > tomnl > mspurity_createdatabase

diff createDatabase.xml @ 7:a3a969a82106 draft

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planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit a1a069e7537aa4594974c74a08fb6e81e527203d
author tomnl
date Wed, 19 Jun 2019 09:27:01 -0400
parents 7c0834ead235
children c34cdaca2fcb
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--- a/createDatabase.xml	Tue Jun 18 14:51:42 2019 -0400
+++ b/createDatabase.xml	Wed Jun 19 09:27:01 2019 -0400
@@ -79,6 +79,24 @@
            <param name="pa" value="averageFragSpectra_output_all.RData"/>
            <output name="createDatabase_output_sqlite" value="createDatabase_output.sqlite" ftype="sqlite" compare="sim_size"/>
         </test>
+        <test>
+            <conditional name="file_load_conditional">
+                <param name="file_load_select" value="yes"/>
+                <param name="input" >
+                    <collection type="list">
+                        <element name="LCMS_1.mzML" value="LCMS_1.mzML"/>
+                        <element name="LCMS_2.mzML" value="LCMS_2.mzML"/>
+                        <element name="LCMSMS_1.mzML" value="LCMSMS_1.mzML"/>
+                        <element name="LCMSMS_2.mzML" value="LCMSMS_2.mzML"/>
+                    </collection>
+                </param>
+            </conditional>
+	         <param name="camera_xcms" value="xcms"/>
+	         <param name="eic" value="true"/>
+           <param name="xset_xa" value="xset_group_LCMS_1_LCMS_2_LCMSMS_1_LCMSMS_2.RData"/>
+           <param name="pa" value="averageFragSpectra_output_all.RData"/>
+           <output name="createDatabase_output_sqlite" value="createDatabase_output_eic.sqlite" ftype="sqlite" compare="sim_size"/>
+        </test>
     </tests>
 
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