Mercurial > repos > tomnl > flag_remove_peaks
comparison msp_split.py @ 12:cb8dce9812ff draft
planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit f79fa34772bbab836d89cf8bad52d49285409a98
| author | tomnl |
|---|---|
| date | Thu, 14 Jun 2018 09:19:47 -0400 |
| parents | 2cba35789adf |
| children |
comparison
equal
deleted
inserted
replaced
| 11:e00a33906b3e | 12:cb8dce9812ff |
|---|---|
| 40 | 40 |
| 41 def main(): | 41 def main(): |
| 42 | 42 |
| 43 p = argparse.ArgumentParser(prog='PROG', | 43 p = argparse.ArgumentParser(prog='PROG', |
| 44 formatter_class=argparse.RawDescriptionHelpFormatter, | 44 formatter_class=argparse.RawDescriptionHelpFormatter, |
| 45 description='''Create filelist for DMA DIMS nearline workflow''', | 45 description='''split msp files''', |
| 46 epilog=textwrap.dedent(''' | 46 ) |
| 47 ------------------------------------------------------------------------- | |
| 48 | 47 |
| 49 Example Usage | 48 p.add_argument('-i', dest='i', help='msp file', required=True) |
| 50 | |
| 51 python dma-filelist-generation.py -i [dir with sample files], [dir with blank files] -o . | |
| 52 | |
| 53 ''')) | |
| 54 | |
| 55 p.add_argument('-i', dest='i', help='dir with sample files', required=True) | |
| 56 p.add_argument('-o', dest='o', help='out dir', required=True) | 49 p.add_argument('-o', dest='o', help='out dir', required=True) |
| 57 p.add_argument('-n', dest='n',) | 50 p.add_argument('-n', dest='n',) |
| 58 | 51 |
| 59 | 52 |
| 60 args = p.parse_args() | 53 args = p.parse_args() |
