# HG changeset patch
# User tomnl
# Date 1527931258 14400
# Node ID a429aae0ebfe7cb9e9a47729e75c62f4de3d315a
# Parent  5d47dd1744358739525d0b18538b1855cae00872
planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit 04023134d8f28e85927ca293373c506484149ead-dirty

diff -r 5d47dd174435 -r a429aae0ebfe create_sqlite_db.R
--- a/create_sqlite_db.R	Fri Jun 01 15:35:04 2018 -0400
+++ b/create_sqlite_db.R	Sat Jun 02 05:20:58 2018 -0400
@@ -213,7 +213,7 @@
 
 if (is.null(xset)){
   DBI::dbWriteTable(con, name='xset_classes', value=xa@xcmsSet@phenoData, row.names=TRUE)
-  add_probmetab(opt$probmetab_result, xset,  con)
+  add_probmetab(opt$probmetab_result, xa@xcmsSet,  con)
 }else{
 
   DBI::dbWriteTable(con, name='xset_classes', value=xset@phenoData, row.names=TRUE)