Mercurial > repos > tomnl > create_sqlite_db

diff create_sqlite_db.R @ 18:f13a7d89afdd draft

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planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit c43e21459ffc8f45349a0af6d60c6783dca6005d-dirty
author tomnl
date Tue, 15 May 2018 08:16:18 -0400
parents 5eebc655f01b
children 906e8e2be944
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line diff
--- a/create_sqlite_db.R	Tue May 15 07:50:10 2018 -0400
+++ b/create_sqlite_db.R	Tue May 15 08:16:18 2018 -0400
@@ -125,7 +125,7 @@
     rtrawColumns <- TRUE
   }
   if (is.null(xset)){
-      xset <- xa@xset
+      xset <- xa@xcmsSet
   }
   # previous check should have matched filelists together
   xset@filepaths <- unname(pa@fileList)