Mercurial > repos > tomnl > create_sqlite_db

diff create_sqlite_db.R @ 22:5d47dd174435 draft

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planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit 04023134d8f28e85927ca293373c506484149ead-dirty
author tomnl
date Fri, 01 Jun 2018 15:35:04 -0400
parents 7f57d501badb
children a429aae0ebfe
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--- a/create_sqlite_db.R	Fri Jun 01 13:44:38 2018 -0400
+++ b/create_sqlite_db.R	Fri Jun 01 15:35:04 2018 -0400
@@ -207,8 +207,8 @@
 
 }
 
-add_extra_table_elucidation('metfrag_results', opt$metfrag_result, con, filter_Score=0.6, filter_Rank=NA)
-add_extra_table_elucidation('sirius_csifingerid_results', opt$sirius_csifingerid_result, con, filter_Score=NA, filter_Rank=5)
+add_extra_table_elucidation('metfrag_results', opt$metfrag_result, con)
+add_extra_table_elucidation('sirius_csifingerid_results', opt$sirius_csifingerid_result, con)
 
 
 if (is.null(xset)){