# HG changeset patch
# User tomnl
# Date 1526386092 14400
# Node ID 257deb956358a67e95d9384f2c5c8928808dcad9
# Parent  07baafb2b620918bca4829544fe8c7f62c85cf8d
planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit c43e21459ffc8f45349a0af6d60c6783dca6005d-dirty

diff -r 07baafb2b620 -r 257deb956358 create_sqlite_db.R
--- a/create_sqlite_db.R	Tue May 15 07:42:01 2018 -0400
+++ b/create_sqlite_db.R	Tue May 15 08:08:12 2018 -0400
@@ -125,7 +125,7 @@
     rtrawColumns <- TRUE
   }
   if (is.null(xset)){
-      xset <- xa@xset
+      xset <- xa@xcmsSet
   }
   # previous check should have matched filelists together
   xset@filepaths <- unname(pa@fileList)