# HG changeset patch
# User tomnl
# Date 1527930863 14400
# Node ID 1e4eee6b7b93b6855f71bce60176cf96f0c06233
# Parent  c5ba8582528491c6bb6c0727972fb9e69e540334
planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit 04023134d8f28e85927ca293373c506484149ead-dirty

diff -r c5ba85825284 -r 1e4eee6b7b93 create_sqlite_db.R
--- a/create_sqlite_db.R	Fri Jun 01 15:28:32 2018 -0400
+++ b/create_sqlite_db.R	Sat Jun 02 05:14:23 2018 -0400
@@ -213,7 +213,7 @@
 
 if (is.null(xset)){
   DBI::dbWriteTable(con, name='xset_classes', value=xa@xcmsSet@phenoData, row.names=TRUE)
-  add_probmetab(opt$probmetab_result, xset,  con)
+  add_probmetab(opt$probmetab_result, xa@xcmsSet,  con)
 }else{
 
   DBI::dbWriteTable(con, name='xset_classes', value=xset@phenoData, row.names=TRUE)