# HG changeset patch
# User tomnl
# Date 1526386383 14400
# Node ID 9d1c2dcba63dc7b76af4daae42ec3ae20bce2aa8
# Parent  44c89290ac66d3f976e7f760e646687cf476e0b2
planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit c43e21459ffc8f45349a0af6d60c6783dca6005d-dirty

diff -r 44c89290ac66 -r 9d1c2dcba63d create_sqlite_db.R
--- a/create_sqlite_db.R	Tue May 15 07:46:51 2018 -0400
+++ b/create_sqlite_db.R	Tue May 15 08:13:03 2018 -0400
@@ -125,7 +125,7 @@
     rtrawColumns <- TRUE
   }
   if (is.null(xset)){
-      xset <- xa@xset
+      xset <- xa@xcmsSet
   }
   # previous check should have matched filelists together
   xset@filepaths <- unname(pa@fileList)