# HG changeset patch
# User tmcgowan
# Date 1416342764 18000
# Node ID 5a0cf2db33828850efc7c17954b4a0884ce72ece

Uploaded

diff -r 000000000000 -r 5a0cf2db3382 tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue Nov 18 15:32:44 2014 -0500
@@ -0,0 +1,24 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="R" version="3.0.2">
+        <repository changeset_revision="b6fe8ca3230d" name="package_r_3_0_2" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="bioc_limma" version="3.22.1">
+        <install version="1.0">
+            <actions>
+                <action type="download_file">http://www.bioconductor.org/packages/release/bioc/src/contrib/limma_3.22.1.tar.gz</action>
+                <action type="set_environment_for_install">
+                    <repository changeset_revision="b6fe8ca3230d" name="package_r_3_0_2" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu">
+                        <package name="R" version="3.0.2" />
+                    </repository>
+                </action>
+                <action type="shell_command">export R_LIBS=$INSTALL_DIR &amp;&amp; R CMD INSTALL limma_3.22.1.tar.gz</action>
+                <action type="set_environment">
+                    <environment_variable action="prepend_to" name="R_LIBS">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+        </readme>
+    </package>
+</tool_dependency>