Mercurial > repos > tiagoantao > raxml

diff raxml.xml @ 50:7bfca3137b5b draft

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planemo upload commit 7a61e716e89a49e8cd50e6653e986a0683f20b91-dirty
author tiagoantao
date Sat, 21 Nov 2015 14:20:20 -0500
parents d1ce5bfa1ca8
children 9f0e3b7d9b1e
line wrap: on
line diff
--- a/raxml.xml	Sat Nov 21 14:15:51 2015 -0500
+++ b/raxml.xml	Sat Nov 21 14:20:20 2015 -0500
@@ -510,8 +510,8 @@
           <param name="infile" value="dna.phy"/>
           <param name="model_type" value="nucleotide"/>
           <param name="base_model" value="GTRCAT"/>
-          <output name="parsimonyTreeReq" file="RAxML_parsimonyTree.galaxy">
-          <output name="bestTree"/>
+	  <output name="parsimonyTreeReq" file="RAxML_parsimonyTree.galaxy" />
+          <output name="bestTree">
               <assert_contents>
                 <has_text_matching expression="Frog" />
               </assert_contents>
@@ -523,14 +523,12 @@
           <param name="model_type" value="nucleotide"/>
           <param name="base_model" value="GTRCAT"/>
           <param name="number_of_runs" value="5"/>
-          <output name="parsimonyTree" file="RAxML_parsimonyTree.galaxy">
-		  <!--
-          <output name="bestTree"/>
+	  <output name="parsimonyTree" file="RAxML_parsimonyTree.galaxy" />
+          <output name="bestTree">
               <assert_contents>
                 <has_text_matching expression="Whale" />
               </assert_contents>
           </output>
--->
       </test>
   </tests>
   <help>